Alvarez-Valin, Fernando: search on Z-Library

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1

Second codon positions of genes and the secondary structures of proteins. Relationships and implications for the origin of the genetic code

Maria Luisa Chiusano, Fernando Alvarez-Valin, Massimo Di Giulio, Giuseppe D'Onofrio, Gaetano Ammirato, Giovanni Colonna, Giorgio Bernardi

Journal:

Year:

2000

Language:

english

File:

PDF, 882 KB

english, 2000

2

Hidden Markov models for gene sequence classification

Mesa, Andrea, Basterrech, Sebastián, Guerberoff, Gustavo, Alvarez-Valin, Fernando

Journal:

Pattern Analysis and Applications

Year:

2016

Language:

english

File:

PDF, 721 KB

english, 2016

3

Conservation of CFTR codon frequency through primates suggests synonymous mutations could have a functional effect

Pizzo, Lucilla, Iriarte, Andrés, Alvarez-Valin, Fernando, Marín, Mónica

Journal:

Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis

Year:

2015

Language:

english

File:

PDF, 2.22 MB

english, 2015

4

Evolutionary Genomics of Vertebrates and Its Implications

GIUSEPPE D'ONOFRIO, KAMEL JABBARI, HÉCTOR MUSTO, FERNANDO ALVAREZ-VALIN, STEPHANE CRUVEILLER, GIORGIO BERNARDI

Journal:

Annals of the New York Academy of Sciences

Year:

1999

File:

PDF, 2.48 MB

1999

5

Genomic GC level, optimal growth temperature, and genome size in prokaryotes

Héctor Musto, Hugo Naya, Alejandro Zavala, Héctor Romero, Fernando Alvarez-Valín, Giorgio Bernardi

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 121 KB

english, 2006

6

Transcriptome analysis of the bloodstream stage from the parasite Trypanosoma vivax

Greif, Gonzalo, Ponce de Leon, Miguel, Lamolle, Guillermo, Rodriguez, Matías, Piñeyro, Dolores, Tavares-Marques, Lucinda M, Reyna-Bello, Armando, Robello, Carlos, Alvarez-Valin, Fernando

Journal:

Year:

2013

Language:

english

File:

PDF, 2.20 MB

english, 2013

7

The correlation between genomic G + C and optimal growth temperature of prokaryotes is robust: A reply to Marashi and Ghalanbor

Hector Musto, Hugo Naya, Alejandro Zavala, Hector Romero, Fernando Alvarez-Valin, Giorgio Bernardi

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 253 KB

english, 2005

8

Kinetoplast adaptations in American strains from Trypanosoma vivax

Greif, Gonzalo, Rodriguez, Matías, Reyna-Bello, Armando, Robello, Carlos, Alvarez-Valin, Fernando

Journal:

Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis

Year:

2015

Language:

english

File:

PDF, 1.39 MB

english, 2015

9

Synonymous and Nonsynonymous Substitutions in Genes fromGramineae: Intragenic Correlations

Fernando Alvarez-Valin, Kamel Jabbari, Nicolas Carels, Giorgio Bernardi

Journal:

Journal of Molecular Evolution

Year:

1999

Language:

english

File:

PDF, 901 KB

english, 1999

10

A stochastic microscopic model for the dynamics of antigenic variation

Guerberoff, Gustavo, Alvarez-Valin, Fernando

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.96 MB

english, 2015

11

How Fast Is the Sessile Ciona?

Berná, Luisa, Alvarez-Valin, Fernando, D'Onofrio, Giuseppe

Journal:

Comparative and Functional Genomics

Year:

2009

Language:

english

File:

PDF, 1.37 MB

english, 2009

12

The Anolis Lizard Genome: An Amniote Genome without Isochores?

Costantini, Maria, Greif, Gonzalo, Alvarez-Valin, Fernando, Bernardi, Giorgio

Journal:

Genome Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 11.76 MB

english, 2016

13

MORPHOMETRIC DIFFERENTIATION OF ENDANGERED PAMPAS DEER (OZOTOCEROS BEZOARTICUS), WITH DESCRIPTION OF NEW SUBSPECIES FROM URUGUAY

González, Susana, Álvarez-Valin, Fernando, Maldonado, Jesús E.

Journal:

Journal of Mammalogy

Year:

2002

Language:

english

File:

PDF, 213 KB

english, 2002

14

Isochores, GC3 and mutation biases in the human genome

Fernando Alvarez-Valin, Guillermo Lamolle, Giorgio Bernardi

Journal:

Year:

2002

Language:

english

File:

PDF, 130 KB

english, 2002

15

A Strategy to Recover a High-Quality, Complete Plastid Sequence from Low-Coverage Whole-Genome Sequencing

Garaycochea, Silvia, Speranza, Pablo, Alvarez-Valin, Fernando

Journal:

Applications in Plant Sciences

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

16

Survey of transcripts expressed by the invasive juvenile stage of the liver flukeFasciola hepatica

Martín Cancela, Natalia Ruétalo, Nicolás Dell'Oca, Edileuza da Silva, Pablo Smircich, Gabriel Rinaldi, Leda Roche, Carlos Carmona, Fernando Alvarez-Valín, Arnaldo Zaha, José F Tort

Journal:

Year:

2010

Language:

english

File:

PDF, 1.37 MB

english, 2010

17

Gene Expression Profiling in the Injured Spinal Cord of Trachemys scripta elegans: An Amniote with Self-Repair Capabilities

Valentin-Kahan, Adrián, García-Tejedor, Gabriela B., Robello, Carlos, Trujillo-Cenóz, Omar, Russo, Raúl E., Alvarez-Valin, Fernando

Journal:

Frontiers in Molecular Neuroscience

Year:

2017

Language:

english

File:

PDF, 5.05 MB

english, 2017

18

Gene Expression, Amino Acid Conservation, and Hydrophobicity Are the Main Factors Shaping Codon Preferences inMycobacterium tuberculosisandMycobacterium leprae

Antonio B. de Miranda, Fernando Alvarez-Valin, Kamel Jabbari, Wim M. Degrave, Giorgio Bernardi

Journal:

Journal of Molecular Evolution

Year:

2000

Language:

english

File:

PDF, 938 KB

english, 2000

19

Evolutionary volatile Cysteines and protein disorder in the fast evolving tunicate Oikopleura dioica

Berná, Luisa, Alvarez-Valin, Fernando

Journal:

Marine Genomics

Year:

2015

Language:

english

File:

PDF, 1.77 MB

english, 2015

20

The Purine Bias of Coding Sequences is Determined by Physicochemical Constraints on Proteins

De Leon, Miguel Ponce, De Miranda, Antonio Basilio, Alvarez-Valin, Fernando, Carels, Nicolas

Journal:

Bioinformatics and Biology Insights

Year:

2014

Language:

english

File:

PDF, 5.69 MB

english, 2014

21

Different mutation profiles associated to P53 accumulation in colorectal cancer

Ignacio López, Ligia P. Oliveira, Paula Tucci, Fernando Álvarez-Valín, Renata A. Coudry, Mónica Marín

Journal:

Year:

2012

Language:

english

File:

PDF, 542 KB

english, 2012

22

Evolutionary relationships in Trypanosoma cruzi: molecular phylogenetics supports the existence of a new major lineage of strains

Carlos Robello, Francisco Gamarro, Santiago Castanys, Fernando Alvarez-Valin

Journal:

Year:

2000

Language:

english

File:

PDF, 130 KB

english, 2000

23

Compositional patterns in the genomes of unicellular eukaryotes

Costantini, Maria, Alvarez-Valin, Fernando, Costantini, Susan, Cammarano, Rosalia, Bernardi, Giorgio

Journal:

Year:

2013

Language:

english

File:

PDF, 1.30 MB

english, 2013

24

Peculiar patterns of amino acid substitution and conservation in the fast evolving tunicate Oikopleura dioica

Luisa Berná, Giuseppe D’Onofrio, Fernando Alvarez-Valin

Journal:

Molecular Phylogenetics and Evolution

Year:

2012

Language:

english

File:

PDF, 894 KB

english, 2012

25

Inaccurate reconstruction of ancestral GC levels creates a “vanishing isochores” effect

Fernando Alvarez-Valin, Oliver Clay, Stéphane Cruveiller, Giorgio Bernardi

Journal:

Molecular Phylogenetics and Evolution

Year:

2004

Language:

english

File:

PDF, 118 KB

english, 2004

26

Morphometric Differentiation of Endangered Pampas Deer (Ozotoceros bezoarticus), with Description of New Subspecies from Uruguay

Susana González, Fernando Álvarez-Valin and Jesús E. Maldonado

Journal:

Journal of Mammalogy

Year:

2002

Language:

english

File:

PDF, 2.05 MB

english, 2002

27

Synonymous and Nonsynonymous Substitutions in Mammalian Genes: Intragenic Correlations

Fernando Alvarez-Valin, Kamel Jabbari, Giorgio Bernardi

Journal:

Journal of Molecular Evolution

Year:

1998

Language:

english

File:

PDF, 1014 KB

english, 1998

28

Silent mutations in the gene encoding the p53 protein are preferentially located in conserved amino acid positions and splicing enhancers

Guillermo Lamolle, Mónica Marin, Fernando Alvarez-Valin

Journal:

Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis

Year:

2006

Language:

english

File:

PDF, 199 KB

english, 2006

29

Expanding an expanded genome: long-read sequencing of Trypanosoma cruzi

Berná, Luisa, Rodriguez, Matias, Chiribao, María Laura, Parodi-Talice, Adriana, Pita, Sebastián, Rijo, Gastón, Alvarez-Valin, Fernando, Robello, Carlos

Journal:

Microbial Genomics

Year:

2018

Language:

english

File:

PDF, 3.45 MB

english, 2018

30

Correlations of nucleotide substitution rates and base composition of mammalian coding sequences with protein structure

Maria Luisa Chiusano, Giuseppe D'Onofrio, Fernando Alvarez-Valin, Kamel Jabbari, Giovanni Colonna, Giorgio Bernardi

Journal:

Year:

1999

Language:

english

File:

PDF, 649 KB

english, 1999

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